Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DBET-201ENST00000630918 3363 ntBASIC16.64■□□□□ 0.25
LPCAT4Q643R3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC036111.1-201ENST00000533973 1582 ntBASIC16.64■□□□□ 0.25
LPCAT4Q643R3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 CROCCP5-201ENST00000436658 830 ntBASIC16.63■□□□□ 0.25
LPCAT4Q643R3 AC006970.2-201ENST00000450065 779 ntBASIC16.63■□□□□ 0.25
LPCAT4Q643R3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 AL445675.2-201ENST00000620291 557 ntBASIC16.63■□□□□ 0.25
LPCAT4Q643R3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT4Q643R3 AC092364.2-201ENST00000596710 2692 ntBASIC16.63■□□□□ 0.25
LPCAT4Q643R3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT4Q643R3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT4Q643R3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms