Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
PCP4P48539 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
PCP4P48539 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 AL445209.1-201ENST00000607269 3491 ntBASIC12.04□□□□□ -0.48
PCP4P48539 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
PCP4P48539 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 BEND3P1-201ENST00000421591 1944 ntBASIC12.03□□□□□ -0.48
PCP4P48539 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC12.03□□□□□ -0.48
PCP4P48539 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PCP4P48539 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.03□□□□□ -0.48
PCP4P48539 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PCP4P48539 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC12.02□□□□□ -0.48
PCP4P48539 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
PCP4P48539 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
PCP4P48539 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
PCP4P48539 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
PCP4P48539 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
PCP4P48539 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.02□□□□□ -0.48
PCP4P48539 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
PCP4P48539 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 CD37-213ENST00000598095 1598 ntTSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 REXO1L1P-202ENST00000608646 1974 ntBASIC12.02□□□□□ -0.49
PCP4P48539 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PCP4P48539 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.02□□□□□ -0.49
PCP4P48539 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms