Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 AC073210.2-201ENST00000430369 194 ntBASIC14.24□□□□□ -0.13
RPL35P42766 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 TNRC18P2-201ENST00000417666 2714 ntBASIC14.24□□□□□ -0.13
RPL35P42766 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RPL35P42766 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 RCC2P6-201ENST00000526625 1557 ntBASIC14.23□□□□□ -0.13
RPL35P42766 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL35P42766 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.23□□□□□ -0.13
RPL35P42766 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL35P42766 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL35P42766 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RPL35P42766 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 AC112777.1-201ENST00000540175 1423 ntBASIC14.23□□□□□ -0.13
RPL35P42766 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35P42766 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL35P42766 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
RPL35P42766 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RPL35P42766 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RPL35P42766 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RPL35P42766 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RPL35P42766 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RPL35P42766 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL35P42766 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL35P42766 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.22□□□□□ -0.13
RPL35P42766 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL35P42766 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RPL35P42766 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL35P42766 KRT18P16-201ENST00000510337 1294 ntBASIC14.22□□□□□ -0.13
RPL35P42766 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL35P42766 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.22□□□□□ -0.13
RPL35P42766 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL35P42766 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RPL35P42766 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms