Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.92■□□□□ 0.46
NFKB1P19838 LYSMD4-203ENST00000378904 2122 ntBASIC17.92■□□□□ 0.46
NFKB1P19838 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NFKB1P19838 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NFKB1P19838 AL023806.1-201ENST00000603994 1649 ntBASIC17.92■□□□□ 0.46
NFKB1P19838 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
NFKB1P19838 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.92■□□□□ 0.46
NFKB1P19838 DRAXINP1-201ENST00000437611 948 ntBASIC17.92■□□□□ 0.46
NFKB1P19838 TOB2P1-201ENST00000469761 992 ntBASIC17.92■□□□□ 0.46
NFKB1P19838 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.92■□□□□ 0.46
NFKB1P19838 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.92■□□□□ 0.46
NFKB1P19838 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.92■□□□□ 0.46
NFKB1P19838 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NFKB1P19838 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.91■□□□□ 0.46
NFKB1P19838 AC002558.1-201ENST00000488906 803 ntBASIC17.91■□□□□ 0.46
NFKB1P19838 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.91■□□□□ 0.46
NFKB1P19838 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.91■□□□□ 0.46
NFKB1P19838 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NFKB1P19838 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NFKB1P19838 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 AC069148.1-201ENST00000608741 768 ntBASIC17.91■□□□□ 0.46
NFKB1P19838 AC019129.2-201ENST00000609837 1235 ntBASIC17.91■□□□□ 0.46
NFKB1P19838 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.91■□□□□ 0.46
NFKB1P19838 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.91■□□□□ 0.46
NFKB1P19838 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.91■□□□□ 0.46
NFKB1P19838 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NFKB1P19838 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.91■□□□□ 0.46
NFKB1P19838 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
NFKB1P19838 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.9■□□□□ 0.46
NFKB1P19838 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.9■□□□□ 0.46
NFKB1P19838 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 LINC00265-3P-201ENST00000447588 903 ntBASIC17.9■□□□□ 0.46
NFKB1P19838 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.9■□□□□ 0.46
NFKB1P19838 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 MIR3180-1-201ENST00000580374 94 ntBASIC17.9■□□□□ 0.46
NFKB1P19838 MIR3180-3-201ENST00000584616 94 ntBASIC17.9■□□□□ 0.46
NFKB1P19838 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.9■□□□□ 0.46
NFKB1P19838 AC091076.1-201ENST00000610741 619 ntBASIC17.9■□□□□ 0.46
NFKB1P19838 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.9■□□□□ 0.46
NFKB1P19838 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.9■□□□□ 0.46
NFKB1P19838 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.9■□□□□ 0.46
NFKB1P19838 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NFKB1P19838 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.89■□□□□ 0.46
NFKB1P19838 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.89■□□□□ 0.46
NFKB1P19838 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms