Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.68■□□□□ 0.26
NCK1P16333 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.68■□□□□ 0.26
NCK1P16333 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NCK1P16333 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NCK1P16333 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.67■□□□□ 0.26
NCK1P16333 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 LYSMD4-203ENST00000378904 2122 ntBASIC16.67■□□□□ 0.26
NCK1P16333 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.67■□□□□ 0.26
NCK1P16333 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NCK1P16333 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.67■□□□□ 0.26
NCK1P16333 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.67■□□□□ 0.26
NCK1P16333 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.67■□□□□ 0.26
NCK1P16333 AL049637.2-201ENST00000641778 930 ntBASIC16.67■□□□□ 0.26
NCK1P16333 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.67■□□□□ 0.26
NCK1P16333 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.67■□□□□ 0.26
NCK1P16333 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NCK1P16333 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCK1P16333 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NCK1P16333 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NCK1P16333 AL390955.1-201ENST00000428694 934 ntBASIC16.66■□□□□ 0.26
NCK1P16333 DDX43P3-201ENST00000441064 443 ntBASIC16.66■□□□□ 0.26
NCK1P16333 CCR12P-201ENST00000446203 998 ntBASIC16.66■□□□□ 0.26
NCK1P16333 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.66■□□□□ 0.26
NCK1P16333 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.66■□□□□ 0.26
NCK1P16333 DOC2GP-204ENST00000639052 2548 ntBASIC16.66■□□□□ 0.26
NCK1P16333 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.66■□□□□ 0.26
NCK1P16333 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NCK1P16333 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCK1P16333 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.66■□□□□ 0.26
NCK1P16333 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.65■□□□□ 0.26
NCK1P16333 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.65■□□□□ 0.26
NCK1P16333 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
NCK1P16333 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.65■□□□□ 0.26
NCK1P16333 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.65■□□□□ 0.26
NCK1P16333 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NCK1P16333 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.65■□□□□ 0.26
NCK1P16333 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms