Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 AC092068.3-201ENST00000587894 2016 ntBASIC16.11■□□□□ 0.17
HTR1AP08908 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 AC078925.2-201ENST00000624013 1973 ntBASIC16.1■□□□□ 0.17
HTR1AP08908 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.1■□□□□ 0.17
HTR1AP08908 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.1■□□□□ 0.17
HTR1AP08908 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.1■□□□□ 0.17
HTR1AP08908 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.1■□□□□ 0.17
HTR1AP08908 AC046185.3-201ENST00000623228 1824 ntBASIC16.1■□□□□ 0.17
HTR1AP08908 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HTR1AP08908 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HTR1AP08908 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HTR1AP08908 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HTR1AP08908 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HTR1AP08908 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.09■□□□□ 0.17
HTR1AP08908 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 AC009949.1-201ENST00000623048 1830 ntBASIC16.09■□□□□ 0.17
HTR1AP08908 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HTR1AP08908 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HTR1AP08908 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.09■□□□□ 0.17
HTR1AP08908 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HTR1AP08908 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.08■□□□□ 0.17
HTR1AP08908 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HTR1AP08908 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HTR1AP08908 CYP2T1P-202ENST00000641596 2535 ntBASIC16.08■□□□□ 0.17
HTR1AP08908 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HTR1AP08908 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HTR1AP08908 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
HTR1AP08908 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.08■□□□□ 0.16
HTR1AP08908 ID1-201ENST00000376105 1233 ntBASIC16.08■□□□□ 0.16
HTR1AP08908 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.08■□□□□ 0.16
HTR1AP08908 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 AC128676.1-201ENST00000454392 318 ntBASIC16.08■□□□□ 0.16
HTR1AP08908 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.08■□□□□ 0.16
HTR1AP08908 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.08■□□□□ 0.16
HTR1AP08908 MIR3180-5-201ENST00000583743 153 ntBASIC16.08■□□□□ 0.16
HTR1AP08908 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.08■□□□□ 0.16
HTR1AP08908 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.08■□□□□ 0.16
HTR1AP08908 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.08■□□□□ 0.16
HTR1AP08908 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 AC022188.1-201ENST00000620960 1664 ntBASIC16.08■□□□□ 0.16
HTR1AP08908 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HTR1AP08908 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.07■□□□□ 0.16
HTR1AP08908 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms