Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.23■□□□□ 0.67
COL1A2P08123 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 VN2R19P-201ENST00000442399 1052 ntBASIC19.23■□□□□ 0.67
COL1A2P08123 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A2P08123 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A2P08123 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A2P08123 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A2P08123 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 AL590787.1-201ENST00000568856 1315 ntBASIC19.23■□□□□ 0.67
COL1A2P08123 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
COL1A2P08123 YBX2P1-201ENST00000394192 760 ntBASIC19.22■□□□□ 0.67
COL1A2P08123 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A2P08123 DNAJB3-201ENST00000446806 729 ntBASIC19.22■□□□□ 0.67
COL1A2P08123 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 HCG4B-203ENST00000450128 991 ntBASIC19.22■□□□□ 0.67
COL1A2P08123 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A2P08123 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A2P08123 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A2P08123 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A2P08123 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A2P08123 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 AL135999.2-201ENST00000622438 1686 ntBASIC19.22■□□□□ 0.67
COL1A2P08123 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A2P08123 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A2P08123 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A2P08123 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL1A2P08123 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL1A2P08123 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.21■□□□□ 0.67
COL1A2P08123 AC004790.2-201ENST00000623588 572 ntBASIC19.21■□□□□ 0.67
COL1A2P08123 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A2P08123 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
COL1A2P08123 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A2P08123 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.21■□□□□ 0.67
COL1A2P08123 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.21■□□□□ 0.67
COL1A2P08123 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.21■□□□□ 0.66
COL1A2P08123 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.21■□□□□ 0.66
COL1A2P08123 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
COL1A2P08123 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
COL1A2P08123 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 UPF3AP3-201ENST00000420996 769 ntBASIC19.2■□□□□ 0.66
COL1A2P08123 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
COL1A2P08123 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.2■□□□□ 0.66
COL1A2P08123 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.2■□□□□ 0.66
COL1A2P08123 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COL1A2P08123 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.2■□□□□ 0.66
COL1A2P08123 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
COL1A2P08123 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A2P08123 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.2■□□□□ 0.66
COL1A2P08123 AC002310.6-201ENST00000624451 1377 ntBASIC19.2■□□□□ 0.66
COL1A2P08123 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
COL1A2P08123 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A2P08123 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL1A2P08123 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A2P08123 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
COL1A2P08123 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A2P08123 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A2P08123 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms