Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 BX276092.2-201ENST00000417668 665 ntBASIC13.97□□□□□ -0.17
IFNA1P01562 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.97□□□□□ -0.17
IFNA1P01562 DUTP2-201ENST00000519164 463 ntBASIC13.97□□□□□ -0.17
IFNA1P01562 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.97□□□□□ -0.17
IFNA1P01562 AC116407.2-201ENST00000613639 860 ntBASIC13.97□□□□□ -0.17
IFNA1P01562 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
IFNA1P01562 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.97□□□□□ -0.17
IFNA1P01562 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IFNA1P01562 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 CYP2T1P-202ENST00000641596 2535 ntBASIC13.97□□□□□ -0.17
IFNA1P01562 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.97□□□□□ -0.17
IFNA1P01562 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFNA1P01562 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
IFNA1P01562 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.96□□□□□ -0.17
IFNA1P01562 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.96□□□□□ -0.17
IFNA1P01562 PRKY-204ENST00000533551 1019 ntBASIC13.96□□□□□ -0.17
IFNA1P01562 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.96□□□□□ -0.17
IFNA1P01562 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.96□□□□□ -0.17
IFNA1P01562 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.96□□□□□ -0.17
IFNA1P01562 AC120498.8-201ENST00000614275 531 ntBASIC13.96□□□□□ -0.17
IFNA1P01562 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFNA1P01562 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IFNA1P01562 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
IFNA1P01562 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.96□□□□□ -0.17
IFNA1P01562 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
IFNA1P01562 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
IFNA1P01562 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
IFNA1P01562 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.96□□□□□ -0.18
IFNA1P01562 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IFNA1P01562 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.96□□□□□ -0.18
IFNA1P01562 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms