Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSPG5O95196 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CSPG5O95196 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.89■□□□□ 0.61
CSPG5O95196 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.89■□□□□ 0.61
CSPG5O95196 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CSPG5O95196 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSPG5O95196 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CSPG5O95196 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CSPG5O95196 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
CSPG5O95196 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.88■□□□□ 0.61
CSPG5O95196 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CSPG5O95196 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.88■□□□□ 0.61
CSPG5O95196 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.88■□□□□ 0.61
CSPG5O95196 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.88■□□□□ 0.61
CSPG5O95196 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.88■□□□□ 0.61
CSPG5O95196 AC108073.2-201ENST00000464002 357 ntBASIC18.88■□□□□ 0.61
CSPG5O95196 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.88■□□□□ 0.61
CSPG5O95196 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.88■□□□□ 0.61
CSPG5O95196 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CSPG5O95196 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.88■□□□□ 0.61
CSPG5O95196 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.88■□□□□ 0.61
CSPG5O95196 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CSPG5O95196 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSPG5O95196 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.87■□□□□ 0.61
CSPG5O95196 CNN2P11-201ENST00000429351 262 ntBASIC18.87■□□□□ 0.61
CSPG5O95196 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.87■□□□□ 0.61
CSPG5O95196 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.87■□□□□ 0.61
CSPG5O95196 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 AC148477.5-201ENST00000625164 1645 ntBASIC18.87■□□□□ 0.61
CSPG5O95196 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 AC090340.1-201ENST00000620778 4980 ntBASIC18.87■□□□□ 0.61
CSPG5O95196 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSPG5O95196 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.87■□□□□ 0.61
CSPG5O95196 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSPG5O95196 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CSPG5O95196 GPR89P-201ENST00000407924 1495 ntBASIC18.86■□□□□ 0.61
CSPG5O95196 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 KRT8P47-201ENST00000604727 1398 ntBASIC18.86■□□□□ 0.61
CSPG5O95196 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
CSPG5O95196 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 SPDYE21P-201ENST00000413323 827 ntBASIC18.86■□□□□ 0.61
CSPG5O95196 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms