Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KDM4BO94953 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KDM4BO94953 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.52■□□□□ 0.08
KDM4BO94953 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.52■□□□□ 0.08
KDM4BO94953 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.52■□□□□ 0.08
KDM4BO94953 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
KDM4BO94953 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
KDM4BO94953 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KDM4BO94953 LINC01126-201ENST00000623515 1646 ntBASIC15.52■□□□□ 0.08
KDM4BO94953 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
KDM4BO94953 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
KDM4BO94953 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
KDM4BO94953 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KDM4BO94953 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
KDM4BO94953 AC063926.3-201ENST00000624734 5658 ntBASIC15.52■□□□□ 0.07
KDM4BO94953 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
KDM4BO94953 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KDM4BO94953 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
KDM4BO94953 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KDM4BO94953 CROCCP2-202ENST00000412962 2773 ntBASIC15.52■□□□□ 0.07
KDM4BO94953 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
KDM4BO94953 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KDM4BO94953 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
KDM4BO94953 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.51■□□□□ 0.07
KDM4BO94953 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.51■□□□□ 0.07
KDM4BO94953 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.51■□□□□ 0.07
KDM4BO94953 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.51■□□□□ 0.07
KDM4BO94953 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.51■□□□□ 0.07
KDM4BO94953 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 MIR4497-201ENST00000583208 89 ntBASIC15.51■□□□□ 0.07
KDM4BO94953 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KDM4BO94953 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 AL118508.1-201ENST00000613502 2345 ntBASIC15.51■□□□□ 0.07
KDM4BO94953 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
KDM4BO94953 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
KDM4BO94953 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.51■□□□□ 0.07
KDM4BO94953 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KDM4BO94953 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.51■□□□□ 0.07
KDM4BO94953 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KDM4BO94953 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
KDM4BO94953 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
KDM4BO94953 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.5■□□□□ 0.07
KDM4BO94953 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.5■□□□□ 0.07
KDM4BO94953 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
KDM4BO94953 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
KDM4BO94953 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.5■□□□□ 0.07
KDM4BO94953 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.5■□□□□ 0.07
KDM4BO94953 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.5■□□□□ 0.07
KDM4BO94953 TSPY26P-202ENST00000565928 3884 ntBASIC15.5■□□□□ 0.07
KDM4BO94953 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.5■□□□□ 0.07
KDM4BO94953 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
KDM4BO94953 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
KDM4BO94953 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM4BO94953 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms