Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.88■□□□□ 0.13
PTP4A3O75365 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 RNF126P1-202ENST00000569893 925 ntBASIC15.88■□□□□ 0.13
PTP4A3O75365 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.88■□□□□ 0.13
PTP4A3O75365 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 AC084018.2-201ENST00000613093 2607 ntBASIC15.88■□□□□ 0.13
PTP4A3O75365 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.87■□□□□ 0.13
PTP4A3O75365 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PTP4A3O75365 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PTP4A3O75365 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PTP4A3O75365 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.87■□□□□ 0.13
PTP4A3O75365 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.87■□□□□ 0.13
PTP4A3O75365 AL359075.1-203ENST00000462729 1002 ntBASIC15.87■□□□□ 0.13
PTP4A3O75365 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.87■□□□□ 0.13
PTP4A3O75365 AC002558.1-201ENST00000488906 803 ntBASIC15.87■□□□□ 0.13
PTP4A3O75365 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.87■□□□□ 0.13
PTP4A3O75365 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 AC006011.2-201ENST00000621313 1158 ntBASIC15.87■□□□□ 0.13
PTP4A3O75365 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.87■□□□□ 0.13
PTP4A3O75365 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PTP4A3O75365 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
PTP4A3O75365 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PTP4A3O75365 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 AC010460.3-201ENST00000511359 1579 ntBASIC15.87■□□□□ 0.13
PTP4A3O75365 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PTP4A3O75365 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A3O75365 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PTP4A3O75365 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.86■□□□□ 0.13
PTP4A3O75365 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PTP4A3O75365 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.86■□□□□ 0.13
PTP4A3O75365 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.86■□□□□ 0.13
PTP4A3O75365 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.86■□□□□ 0.13
PTP4A3O75365 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.86■□□□□ 0.13
PTP4A3O75365 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.86■□□□□ 0.13
PTP4A3O75365 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.86■□□□□ 0.13
PTP4A3O75365 VENTXP5-201ENST00000523979 775 ntBASIC15.86■□□□□ 0.13
PTP4A3O75365 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.86■□□□□ 0.13
PTP4A3O75365 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.86■□□□□ 0.13
PTP4A3O75365 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTP4A3O75365 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.86■□□□□ 0.13
PTP4A3O75365 AL596257.1-201ENST00000641463 2694 ntBASIC15.86■□□□□ 0.13
PTP4A3O75365 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms