Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
FOXN3O00409 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXN3O00409 AC246785.2-201ENST00000432512 513 ntBASIC18.85■□□□□ 0.61
FOXN3O00409 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
FOXN3O00409 TSSC2-201ENST00000450217 709 ntBASIC18.85■□□□□ 0.61
FOXN3O00409 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXN3O00409 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXN3O00409 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
FOXN3O00409 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXN3O00409 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
FOXN3O00409 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
FOXN3O00409 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
FOXN3O00409 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXN3O00409 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 PCDHA12-202ENST00000613593 2588 ntBASIC18.84■□□□□ 0.61
FOXN3O00409 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
FOXN3O00409 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FOXN3O00409 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXN3O00409 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXN3O00409 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 AC109462.3-201ENST00000573934 613 ntBASIC18.84■□□□□ 0.61
FOXN3O00409 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FOXN3O00409 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN3O00409 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN3O00409 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
FOXN3O00409 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.83■□□□□ 0.61
FOXN3O00409 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 KRT18P1-202ENST00000452408 1331 ntBASIC18.83■□□□□ 0.61
FOXN3O00409 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.83■□□□□ 0.61
FOXN3O00409 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN3O00409 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.83■□□□□ 0.61
FOXN3O00409 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
FOXN3O00409 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXN3O00409 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXN3O00409 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FOXN3O00409 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
FOXN3O00409 AC122714.2-201ENST00000502787 707 ntBASIC18.83■□□□□ 0.6
FOXN3O00409 KRT18P35-201ENST00000510488 1269 ntBASIC18.83■□□□□ 0.6
FOXN3O00409 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXN3O00409 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXN3O00409 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.83■□□□□ 0.6
FOXN3O00409 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FOXN3O00409 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 AL049757.1-201ENST00000616842 1596 ntBASIC18.83■□□□□ 0.6
FOXN3O00409 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.83■□□□□ 0.6
FOXN3O00409 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.83■□□□□ 0.6
FOXN3O00409 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms