Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 MIR1238-201ENST00000408483 83 ntBASIC16.31■□□□□ 0.2
TNFRSF11BO00300 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 AC098590.1-201ENST00000468126 897 ntBASIC16.31■□□□□ 0.2
TNFRSF11BO00300 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 AC105020.1-201ENST00000435356 2205 ntBASIC16.3■□□□□ 0.2
TNFRSF11BO00300 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 TSPY20P-201ENST00000450910 630 ntBASIC16.3■□□□□ 0.2
TNFRSF11BO00300 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFRSF11BO00300 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 TSPY14P-201ENST00000303979 915 ntBASIC16.29■□□□□ 0.2
TNFRSF11BO00300 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 GCSHP5-201ENST00000443090 522 ntBASIC16.29■□□□□ 0.2
TNFRSF11BO00300 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms