Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 LINC02012-201ENST00000608206 1725 ntBASIC18.74■□□□□ 0.59
RCCD1A6NED2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.74■□□□□ 0.59
RCCD1A6NED2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCCD1A6NED2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 LINC01568-207ENST00000641790 1380 ntBASIC18.73■□□□□ 0.59
RCCD1A6NED2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 TSPY12P-201ENST00000421279 868 ntBASIC18.73■□□□□ 0.59
RCCD1A6NED2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.73■□□□□ 0.59
RCCD1A6NED2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCCD1A6NED2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SPDYE15P-201ENST00000424157 909 ntBASIC18.72■□□□□ 0.59
RCCD1A6NED2 AC034232.1-201ENST00000506026 1064 ntBASIC18.72■□□□□ 0.59
RCCD1A6NED2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 AL441883.1-201ENST00000566170 1045 ntBASIC18.72■□□□□ 0.59
RCCD1A6NED2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCCD1A6NED2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.72■□□□□ 0.59
RCCD1A6NED2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 AC092597.1-201ENST00000487352 616 ntBASIC18.71■□□□□ 0.59
RCCD1A6NED2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.71■□□□□ 0.59
RCCD1A6NED2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RCCD1A6NED2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms