Protein–RNA interactions for Protein: A6NCF5

KLHL33, Kelch-like protein 33, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL33A6NCF5 TPSP2-201ENST00000561760 610 ntBASIC17.65■□□□□ 0.42
KLHL33A6NCF5 AC012615.1-201ENST00000565797 1299 ntBASIC17.65■□□□□ 0.42
KLHL33A6NCF5 MIR3180-1-201ENST00000580374 94 ntBASIC17.65■□□□□ 0.42
KLHL33A6NCF5 MIR3180-3-201ENST00000584616 94 ntBASIC17.65■□□□□ 0.42
KLHL33A6NCF5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL33A6NCF5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KLHL33A6NCF5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 AC012317.2-201ENST00000623305 2251 ntBASIC17.64■□□□□ 0.41
KLHL33A6NCF5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 FLJ13224-201ENST00000313737 1514 ntBASIC17.64■□□□□ 0.41
KLHL33A6NCF5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 AC090340.1-201ENST00000620778 4980 ntBASIC17.64■□□□□ 0.41
KLHL33A6NCF5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 HCG11-201ENST00000411553 5696 ntBASIC17.64■□□□□ 0.41
KLHL33A6NCF5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL33A6NCF5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 LINC00896-202ENST00000609602 2128 ntBASIC17.63■□□□□ 0.41
KLHL33A6NCF5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 HCG4P8-203ENST00000443049 980 ntBASIC17.63■□□□□ 0.41
KLHL33A6NCF5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 AC112698.1-201ENST00000510299 916 ntBASIC17.63■□□□□ 0.41
KLHL33A6NCF5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 AC116407.2-201ENST00000613639 860 ntBASIC17.63■□□□□ 0.41
KLHL33A6NCF5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 AC233702.3-201ENST00000578656 1387 ntBASIC17.63■□□□□ 0.41
KLHL33A6NCF5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL33A6NCF5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL33A6NCF5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms