Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
AP4S1Q9Y587 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
AP4S1Q9Y587 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
AP4S1Q9Y587 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.7■□□□□ 0.26
AP4S1Q9Y587 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.7■□□□□ 0.26
AP4S1Q9Y587 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 RARRES2P10-201ENST00000564312 460 ntBASIC16.7■□□□□ 0.26
AP4S1Q9Y587 RARRES2P6-201ENST00000567333 442 ntBASIC16.7■□□□□ 0.26
AP4S1Q9Y587 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 CR392000.1-201ENST00000624770 1228 ntBASIC16.7■□□□□ 0.26
AP4S1Q9Y587 AC133041.1-202ENST00000642053 222 ntBASIC16.7■□□□□ 0.26
AP4S1Q9Y587 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.7■□□□□ 0.26
AP4S1Q9Y587 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 IKBKGP1-201ENST00000612193 1073 ntBASIC16.69■□□□□ 0.26
AP4S1Q9Y587 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4S1Q9Y587 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms