Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
NLRC4Q9NPP4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRC4Q9NPP4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NLRC4Q9NPP4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
NLRC4Q9NPP4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 MTCL1P1-201ENST00000446207 792 ntBASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 HYMAI.1-201ENST00000620949 238 ntBASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NLRC4Q9NPP4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 HOMER2P1-201ENST00000455653 964 ntBASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 AC068472.1-201ENST00000474589 881 ntBASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 RNF126P1-202ENST00000569893 925 ntBASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 AC005332.3-201ENST00000589904 676 ntBASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
NLRC4Q9NPP4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 BX276092.7-203ENST00000637198 1536 ntBASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 LINC01311-201ENST00000565162 1445 ntBASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
NLRC4Q9NPP4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.11■□□□□ 0.65
NLRC4Q9NPP4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms