Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
TWNKQ96RR1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TWNKQ96RR1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TWNKQ96RR1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.69■□□□□ 0.58
TWNKQ96RR1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
TWNKQ96RR1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TWNKQ96RR1 LYSMD4-203ENST00000378904 2122 ntBASIC18.68■□□□□ 0.58
TWNKQ96RR1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 AC148477.5-201ENST00000625164 1645 ntBASIC18.68■□□□□ 0.58
TWNKQ96RR1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 FGFR3P6-201ENST00000457012 610 ntBASIC18.68■□□□□ 0.58
TWNKQ96RR1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWNKQ96RR1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TWNKQ96RR1 FZD10-202ENST00000539839 3282 ntBASIC18.68■□□□□ 0.58
TWNKQ96RR1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MTDHP3-201ENST00000594186 672 ntBASIC18.67■□□□□ 0.58
TWNKQ96RR1 AC008608.2-201ENST00000606089 416 ntBASIC18.67■□□□□ 0.58
TWNKQ96RR1 AL355877.3-201ENST00000622820 899 ntBASIC18.67■□□□□ 0.58
TWNKQ96RR1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 AC004817.3-201ENST00000602957 2129 ntBASIC18.67■□□□□ 0.58
TWNKQ96RR1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWNKQ96RR1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TWNKQ96RR1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 IGHV3-52-201ENST00000519770 353 ntBASIC18.66■□□□□ 0.58
TWNKQ96RR1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 LINC01711-201ENST00000598340 967 ntBASIC18.66■□□□□ 0.58
TWNKQ96RR1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 TP73-AS1-207ENST00000624167 988 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms