Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 AL023806.1-201ENST00000603994 1649 ntBASIC20.87■□□□□ 0.93
NEK1Q96PY6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 AC122714.2-201ENST00000502787 707 ntBASIC20.87■□□□□ 0.93
NEK1Q96PY6 Z69720.1-201ENST00000601483 472 ntBASIC20.87■□□□□ 0.93
NEK1Q96PY6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NEK1Q96PY6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEK1Q96PY6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 UPK3BP1-201ENST00000428678 509 ntBASIC20.86■□□□□ 0.93
NEK1Q96PY6 LINC00265-3P-201ENST00000447588 903 ntBASIC20.86■□□□□ 0.93
NEK1Q96PY6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.86■□□□□ 0.93
NEK1Q96PY6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEK1Q96PY6 LTB4R2-202ENST00000528054 3092 ntBASIC20.86■□□□□ 0.93
NEK1Q96PY6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 FAM220CP-201ENST00000395253 831 ntBASIC20.85■□□□□ 0.93
NEK1Q96PY6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 IGHV3-47-201ENST00000425060 335 ntBASIC20.85■□□□□ 0.93
NEK1Q96PY6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 KRT17P6-201ENST00000453795 1220 ntBASIC20.85■□□□□ 0.93
NEK1Q96PY6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 AL139327.4-201ENST00000612362 153 ntBASIC20.85■□□□□ 0.93
NEK1Q96PY6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEK1Q96PY6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NEK1Q96PY6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms