Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FGD4Q96M96 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
FGD4Q96M96 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 DDX43P3-201ENST00000441064 443 ntBASIC19.9■□□□□ 0.78
FGD4Q96M96 DNAJB3-202ENST00000449667 1266 ntBASIC19.9■□□□□ 0.78
FGD4Q96M96 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.9■□□□□ 0.78
FGD4Q96M96 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 AL513190.1-201ENST00000621254 727 ntBASIC19.9■□□□□ 0.78
FGD4Q96M96 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FGD4Q96M96 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.9■□□□□ 0.78
FGD4Q96M96 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FGD4Q96M96 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FGD4Q96M96 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.9■□□□□ 0.78
FGD4Q96M96 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FGD4Q96M96 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FGD4Q96M96 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
FGD4Q96M96 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.89■□□□□ 0.77
FGD4Q96M96 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
FGD4Q96M96 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.89■□□□□ 0.77
FGD4Q96M96 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.89■□□□□ 0.77
FGD4Q96M96 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
FGD4Q96M96 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.89■□□□□ 0.77
FGD4Q96M96 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.89■□□□□ 0.77
FGD4Q96M96 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.89■□□□□ 0.77
FGD4Q96M96 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 AP000997.3-201ENST00000623333 2250 ntBASIC19.89■□□□□ 0.77
FGD4Q96M96 AC004790.2-201ENST00000623588 572 ntBASIC19.89■□□□□ 0.77
FGD4Q96M96 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FGD4Q96M96 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FGD4Q96M96 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 BX276092.7-203ENST00000637198 1536 ntBASIC19.88■□□□□ 0.77
FGD4Q96M96 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
FGD4Q96M96 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 PMS2P2-201ENST00000425039 1128 ntBASIC19.88■□□□□ 0.77
FGD4Q96M96 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 YBX1P5-201ENST00000509441 847 ntBASIC19.88■□□□□ 0.77
FGD4Q96M96 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 OR7E47P-204ENST00000575924 449 ntBASIC19.88■□□□□ 0.77
FGD4Q96M96 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 AL805961.1-202ENST00000641562 540 ntBASIC19.88■□□□□ 0.77
FGD4Q96M96 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 REXO1L9P-201ENST00000604264 2108 ntBASIC19.88■□□□□ 0.77
FGD4Q96M96 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FGD4Q96M96 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.88■□□□□ 0.77
FGD4Q96M96 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FGD4Q96M96 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FGD4Q96M96 AC009336.1-201ENST00000608941 1553 ntBASIC19.87■□□□□ 0.77
FGD4Q96M96 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.87■□□□□ 0.77
FGD4Q96M96 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
FGD4Q96M96 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
FGD4Q96M96 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.87■□□□□ 0.77
FGD4Q96M96 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FGD4Q96M96 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
FGD4Q96M96 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms