Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 AL138966.2-201ENST00000621997 464 ntBASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC44A1Q8WWI5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 AC046185.3-201ENST00000623228 1824 ntBASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A1Q8WWI5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 UBALD1-205ENST00000590891 2641 ntBASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 KRT18P48-201ENST00000434763 852 ntBASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms