Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 INTS4P1-201ENST00000438455 1935 ntBASIC18.55■□□□□ 0.56
RNF139Q8WU17 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC009949.1-201ENST00000623048 1830 ntBASIC18.54■□□□□ 0.56
RNF139Q8WU17 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC004870.1-201ENST00000315132 882 ntBASIC18.54■□□□□ 0.56
RNF139Q8WU17 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 TPM4P1-201ENST00000436100 807 ntBASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC010460.3-201ENST00000511359 1579 ntBASIC18.54■□□□□ 0.56
RNF139Q8WU17 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF139Q8WU17 GNAS-203ENST00000306120 1878 ntBASIC18.54■□□□□ 0.56
RNF139Q8WU17 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF139Q8WU17 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 DDX43P3-201ENST00000441064 443 ntBASIC18.53■□□□□ 0.56
RNF139Q8WU17 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 RN7SL510P-201ENST00000581311 263 ntBASIC18.53■□□□□ 0.56
RNF139Q8WU17 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF139Q8WU17 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF139Q8WU17 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 AC132008.2-207ENST00000454517 770 ntBASIC18.52■□□□□ 0.56
RNF139Q8WU17 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF139Q8WU17 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF139Q8WU17 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF139Q8WU17 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms