Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC016396.2-201ENST00000562575 1417 ntBASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 FAM197Y1-201ENST00000421178 764 ntBASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 AL359736.2-201ENST00000621992 437 ntBASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 AL135905.2-201ENST00000584934 1404 ntBASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3IL1Q8TBN0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CD177P1-201ENST00000606252 935 ntBASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 LINC00167-201ENST00000530583 1419 ntBASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB3IL1Q8TBN0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 NUDT16P1-203ENST00000513809 620 ntBASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 AC010240.3-201ENST00000607688 395 ntBASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB3IL1Q8TBN0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms