Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 FAM197Y3-203ENST00000618346 717 ntBASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 AC099398.1-201ENST00000567919 2776 ntBASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 MIR1233-2-201ENST00000408138 82 ntBASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 MIR1233-1-201ENST00000408722 82 ntBASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 UNC93B6-202ENST00000528242 690 ntBASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.49■□□□□ 0.55
SHKBP1Q8TBC3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 COX5BP2-201ENST00000392354 334 ntBASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 SPDYE21P-201ENST00000413323 827 ntBASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHKBP1Q8TBC3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.47■□□□□ 0.55
SHKBP1Q8TBC3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms