Protein–RNA interactions for Protein: Q8N488

RYBP, RING1 and YY1-binding protein, humanhuman

Predicted RBP Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYBPQ8N488 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.1■□□□□ 0.49
RYBPQ8N488 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.1■□□□□ 0.49
RYBPQ8N488 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.1■□□□□ 0.49
RYBPQ8N488 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.1■□□□□ 0.49
RYBPQ8N488 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RYBPQ8N488 AL121894.2-201ENST00000602977 491 ntBASIC18.1■□□□□ 0.49
RYBPQ8N488 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.1■□□□□ 0.49
RYBPQ8N488 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RYBPQ8N488 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.1■□□□□ 0.49
RYBPQ8N488 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 LETM1P2-201ENST00000597330 2178 ntBASIC18.1■□□□□ 0.49
RYBPQ8N488 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RYBPQ8N488 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.1■□□□□ 0.49
RYBPQ8N488 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
RYBPQ8N488 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RYBPQ8N488 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RYBPQ8N488 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RYBPQ8N488 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RYBPQ8N488 TP73-AS1-210ENST00000637775 1455 ntBASIC18.09■□□□□ 0.49
RYBPQ8N488 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.09■□□□□ 0.49
RYBPQ8N488 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 POM121L3P-201ENST00000419331 1163 ntBASIC18.09■□□□□ 0.49
RYBPQ8N488 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.09■□□□□ 0.49
RYBPQ8N488 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.09■□□□□ 0.49
RYBPQ8N488 AC009533.2-201ENST00000543664 586 ntBASIC18.09■□□□□ 0.49
RYBPQ8N488 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.09■□□□□ 0.49
RYBPQ8N488 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.09■□□□□ 0.49
RYBPQ8N488 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
RYBPQ8N488 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RYBPQ8N488 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.09■□□□□ 0.49
RYBPQ8N488 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
RYBPQ8N488 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.09■□□□□ 0.49
RYBPQ8N488 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RYBPQ8N488 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RYBPQ8N488 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RYBPQ8N488 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RYBPQ8N488 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 AC125634.1-201ENST00000438758 1403 ntBASIC18.08■□□□□ 0.49
RYBPQ8N488 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RYBPQ8N488 KRT8P47-201ENST00000604727 1398 ntBASIC18.08■□□□□ 0.49
RYBPQ8N488 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.08■□□□□ 0.48
RYBPQ8N488 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.08■□□□□ 0.48
RYBPQ8N488 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.08■□□□□ 0.48
RYBPQ8N488 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.08■□□□□ 0.48
RYBPQ8N488 KRT16P4-201ENST00000453883 522 ntBASIC18.08■□□□□ 0.48
RYBPQ8N488 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.08■□□□□ 0.48
RYBPQ8N488 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 UNC93B7-201ENST00000509439 705 ntBASIC18.08■□□□□ 0.48
RYBPQ8N488 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.08■□□□□ 0.48
RYBPQ8N488 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.08■□□□□ 0.48
RYBPQ8N488 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 AL591684.3-201ENST00000605187 298 ntBASIC18.08■□□□□ 0.48
RYBPQ8N488 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RYBPQ8N488 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RYBPQ8N488 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms