Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AL020989.1-201ENST00000422979 469 ntBASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AC022898.2-201ENST00000616822 1312 ntBASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.98□□□□□ -0.01
RAI1Q7Z5J4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AC120498.9-201ENST00000339021 3867 ntBASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 NOC2LP1-202ENST00000452600 2235 ntBASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 FLJ13224-201ENST00000313737 1514 ntBASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI1Q7Z5J4 AL049757.1-201ENST00000616842 1596 ntBASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 ACTG1P4-201ENST00000425123 1122 ntBASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 HTR5BP-201ENST00000430851 1154 ntBASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 ADH5P3-201ENST00000433842 1137 ntBASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 MKNK2P1-201ENST00000437526 628 ntBASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 DDX43P3-201ENST00000441064 443 ntBASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.96□□□□□ -0.01
RAI1Q7Z5J4 DUTP2-201ENST00000519164 463 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms