Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 IGHV3-47-201ENST00000425060 335 ntBASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC138894.3-201ENST00000603787 634 ntBASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 AL138831.2-201ENST00000606564 490 ntBASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 BX276092.7-203ENST00000637198 1536 ntBASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 NUS1P2-201ENST00000417358 873 ntBASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 LINC01711-201ENST00000598340 967 ntBASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQA1Q5Y7H0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 FAM220CP-201ENST00000395253 831 ntBASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 NUS1P1-201ENST00000446295 882 ntBASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 AL121772.3-201ENST00000610840 674 ntBASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 TP73-AS1-210ENST00000637775 1455 ntBASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.46■□□□□ 0.22
HLA-DQA1Q5Y7H0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DQA1Q5Y7H0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DQA1Q5Y7H0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1Q5Y7H0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms