Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDR1P51861 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.33■□□□□ 0.68
CDR1P51861 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDR1P51861 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.33■□□□□ 0.68
CDR1P51861 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR1P51861 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.32■□□□□ 0.68
CDR1P51861 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.32■□□□□ 0.68
CDR1P51861 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.32■□□□□ 0.68
CDR1P51861 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 AC073592.3-201ENST00000625118 1834 ntBASIC19.32■□□□□ 0.68
CDR1P51861 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDR1P51861 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDR1P51861 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR1P51861 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR1P51861 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDR1P51861 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDR1P51861 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 GNAS-203ENST00000306120 1878 ntBASIC19.31■□□□□ 0.68
CDR1P51861 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR1P51861 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR1P51861 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.31■□□□□ 0.68
CDR1P51861 AL845331.1-201ENST00000424978 1190 ntBASIC19.31■□□□□ 0.68
CDR1P51861 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.31■□□□□ 0.68
CDR1P51861 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CDR1P51861 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 AC008764.6-201ENST00000595909 2069 ntBASIC19.31■□□□□ 0.68
CDR1P51861 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR1P51861 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR1P51861 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.3■□□□□ 0.68
CDR1P51861 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDR1P51861 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.3■□□□□ 0.68
CDR1P51861 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.3■□□□□ 0.68
CDR1P51861 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDR1P51861 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.3■□□□□ 0.68
CDR1P51861 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR1P51861 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.3■□□□□ 0.68
CDR1P51861 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms