Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CHGBP05060 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGBP05060 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.16■□□□□ 0.98
CHGBP05060 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHGBP05060 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGBP05060 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.16■□□□□ 0.98
CHGBP05060 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.16■□□□□ 0.98
CHGBP05060 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.16■□□□□ 0.98
CHGBP05060 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.16■□□□□ 0.98
CHGBP05060 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGBP05060 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.16■□□□□ 0.98
CHGBP05060 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.16■□□□□ 0.98
CHGBP05060 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.16■□□□□ 0.98
CHGBP05060 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 LYSMD4-203ENST00000378904 2122 ntBASIC21.16■□□□□ 0.98
CHGBP05060 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGBP05060 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.16■□□□□ 0.98
CHGBP05060 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHGBP05060 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CHGBP05060 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
CHGBP05060 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.15■□□□□ 0.98
CHGBP05060 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHGBP05060 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGBP05060 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGBP05060 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 GNAS-203ENST00000306120 1878 ntBASIC21.15■□□□□ 0.98
CHGBP05060 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.15■□□□□ 0.98
CHGBP05060 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGBP05060 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGBP05060 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.15■□□□□ 0.98
CHGBP05060 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGBP05060 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHGBP05060 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHGBP05060 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.14■□□□□ 0.98
CHGBP05060 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHGBP05060 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGBP05060 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.14■□□□□ 0.97
CHGBP05060 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGBP05060 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.14■□□□□ 0.97
CHGBP05060 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.14■□□□□ 0.97
CHGBP05060 SPDYE21P-201ENST00000413323 827 ntBASIC21.14■□□□□ 0.97
CHGBP05060 FAAHP1-202ENST00000446499 1238 ntBASIC21.14■□□□□ 0.97
CHGBP05060 FAM197Y8-203ENST00000450145 560 ntBASIC21.14■□□□□ 0.97
CHGBP05060 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CHGBP05060 STK25P1-201ENST00000585406 838 ntBASIC21.14■□□□□ 0.97
CHGBP05060 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.14■□□□□ 0.97
CHGBP05060 LINC01711-201ENST00000598340 967 ntBASIC21.14■□□□□ 0.97
CHGBP05060 AC025062.2-201ENST00000605477 670 ntBASIC21.14■□□□□ 0.97
CHGBP05060 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.14■□□□□ 0.97
CHGBP05060 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.14■□□□□ 0.97
CHGBP05060 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGBP05060 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGBP05060 AC079776.2-201ENST00000641154 1609 ntBASIC21.14■□□□□ 0.97
CHGBP05060 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CHGBP05060 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CHGBP05060 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.14■□□□□ 0.97
CHGBP05060 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.14■□□□□ 0.97
CHGBP05060 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHGBP05060 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.13■□□□□ 0.97
CHGBP05060 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.13■□□□□ 0.97
CHGBP05060 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.13■□□□□ 0.97
CHGBP05060 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms