Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 AL645608.8-201ENST00000606034 2086 ntBASIC17.91■□□□□ 0.46
CCDC78A2IDD5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.91■□□□□ 0.46
CCDC78A2IDD5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC78A2IDD5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 AC080080.1-201ENST00000625121 2420 ntBASIC17.9■□□□□ 0.46
CCDC78A2IDD5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 MTCL1P1-201ENST00000446207 792 ntBASIC17.9■□□□□ 0.46
CCDC78A2IDD5 AC068472.1-201ENST00000474589 881 ntBASIC17.9■□□□□ 0.46
CCDC78A2IDD5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC78A2IDD5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC78A2IDD5 OR6D1P-203ENST00000641209 4860 ntBASIC17.89■□□□□ 0.46
CCDC78A2IDD5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CCDC78A2IDD5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 AC108860.2-201ENST00000562760 2183 ntBASIC17.89■□□□□ 0.45
CCDC78A2IDD5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 AL031133.1-201ENST00000406807 723 ntBASIC17.89■□□□□ 0.45
CCDC78A2IDD5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 TSPY22P-201ENST00000427496 604 ntBASIC17.89■□□□□ 0.45
CCDC78A2IDD5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 AC087388.1-201ENST00000571370 1112 ntBASIC17.89■□□□□ 0.45
CCDC78A2IDD5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC78A2IDD5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC78A2IDD5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC78A2IDD5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC78A2IDD5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms