Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.53■□□□□ 0.4
SSU72Q9NP77 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSU72Q9NP77 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 AC093525.9-201ENST00000624961 1746 ntBASIC17.52■□□□□ 0.4
SSU72Q9NP77 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 UNC93B2-201ENST00000285383 730 ntBASIC17.52■□□□□ 0.4
SSU72Q9NP77 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 MIR935-201ENST00000401179 91 ntBASIC17.52■□□□□ 0.4
SSU72Q9NP77 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 NEK4P2-201ENST00000580004 1012 ntBASIC17.52■□□□□ 0.4
SSU72Q9NP77 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.52■□□□□ 0.4
SSU72Q9NP77 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSU72Q9NP77 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.52■□□□□ 0.39
SSU72Q9NP77 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SSU72Q9NP77 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SSU72Q9NP77 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSU72Q9NP77 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.39
SSU72Q9NP77 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 AC124947.2-201ENST00000547118 1133 ntBASIC17.51■□□□□ 0.39
SSU72Q9NP77 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 FITM1-202ENST00000559294 800 ntBASIC17.51■□□□□ 0.39
SSU72Q9NP77 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 AC026691.1-201ENST00000602502 2017 ntBASIC17.51■□□□□ 0.39
SSU72Q9NP77 AC009154.2-201ENST00000621177 724 ntBASIC17.51■□□□□ 0.39
SSU72Q9NP77 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 AC078925.2-201ENST00000624013 1973 ntBASIC17.51■□□□□ 0.39
SSU72Q9NP77 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SSU72Q9NP77 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSU72Q9NP77 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 AC009947.2-201ENST00000444014 672 ntBASIC17.5■□□□□ 0.39
SSU72Q9NP77 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 RBM17P1-201ENST00000453646 1190 ntBASIC17.5■□□□□ 0.39
SSU72Q9NP77 AC002558.1-201ENST00000488906 803 ntBASIC17.5■□□□□ 0.39
SSU72Q9NP77 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms