Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 COX5BP2-201ENST00000392354 334 ntBASIC18.19■□□□□ 0.5
BRD9Q9H8M2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 MCCD1P2-201ENST00000423228 335 ntBASIC18.19■□□□□ 0.5
BRD9Q9H8M2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 KRT18P2-201ENST00000447938 1258 ntBASIC18.19■□□□□ 0.5
BRD9Q9H8M2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 AC009113.1-201ENST00000570267 2443 ntBASIC18.19■□□□□ 0.5
BRD9Q9H8M2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.19■□□□□ 0.5
BRD9Q9H8M2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AC002310.6-201ENST00000624451 1377 ntBASIC18.18■□□□□ 0.5
BRD9Q9H8M2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 SIRPAP1-201ENST00000448467 1770 ntBASIC18.18■□□□□ 0.5
BRD9Q9H8M2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AP006288.1-201ENST00000446065 395 ntBASIC18.18■□□□□ 0.5
BRD9Q9H8M2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 MIR4751-201ENST00000578027 74 ntBASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 AC004706.3-202ENST00000621574 984 ntBASIC18.18■□□□□ 0.5
BRD9Q9H8M2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRD9Q9H8M2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 ELK2BP-201ENST00000415014 1224 ntBASIC18.17■□□□□ 0.5
BRD9Q9H8M2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms