Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 VENTXP7-201ENST00000475503 772 ntBASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 IGHV3-52-201ENST00000519770 353 ntBASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 DRAXINP1-201ENST00000437611 948 ntBASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 TSSC2-201ENST00000450217 709 ntBASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 AC109462.3-201ENST00000573934 613 ntBASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 AC116353.5-201ENST00000638148 1699 ntBASIC17.23■□□□□ 0.35
PDLIM5Q96HC4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM5Q96HC4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms