Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 LINC00554-201ENST00000564841 3011 ntBASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 AC133681.1-201ENST00000465482 601 ntBASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 AC116353.5-201ENST00000638148 1699 ntBASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNIH3Q8TBE1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AC132872.4-202ENST00000622924 2756 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AC092171.3-201ENST00000610122 2651 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 ID1-201ENST00000376105 1233 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 MESTP1-201ENST00000404287 994 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 RNA5SP413-201ENST00000516373 109 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 AC026691.1-201ENST00000602502 2017 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 HYMAI-201ENST00000635591 3347 ntBASIC16.16■□□□□ 0.18
CNIH3Q8TBE1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 AC096733.2-201ENST00000609937 1394 ntBASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms