Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PHTF2Q8N3S3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 PMS2P1-201ENST00000431037 1228 ntBASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 AC139887.3-201ENST00000568585 713 ntBASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHTF2Q8N3S3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PHTF2Q8N3S3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AC097374.2-201ENST00000618617 1306 ntBASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AC106730.1-201ENST00000566722 1090 ntBASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 AC006538.3-201ENST00000612495 578 ntBASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHTF2Q8N3S3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 AC093010.1-201ENST00000473625 1624 ntBASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms