Protein–RNA interactions for Protein: Q6VB84

FOXD4L3, Forkhead box protein D4-like 3, humanhuman

Predicted RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3Q6VB84 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXD4L3Q6VB84 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 MIR3917-201ENST00000580971 93 ntBASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 FAM87A-204ENST00000613235 858 ntBASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L3Q6VB84 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 AL138688.1-201ENST00000624851 1594 ntBASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L3Q6VB84 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD4L3Q6VB84 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FOXD4L3Q6VB84 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms