Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AC010507.1-201ENST00000633895 436 ntBASIC20.84■□□□□ 0.93
CACNB3P54284 AL805961.1-202ENST00000641562 540 ntBASIC20.84■□□□□ 0.93
CACNB3P54284 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNB3P54284 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNB3P54284 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNB3P54284 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNB3P54284 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.84■□□□□ 0.93
CACNB3P54284 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.84■□□□□ 0.93
CACNB3P54284 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CACNB3P54284 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNB3P54284 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.83■□□□□ 0.93
CACNB3P54284 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CACNB3P54284 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNB3P54284 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CACNB3P54284 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 LINC00982-205ENST00000420957 435 ntBASIC20.83■□□□□ 0.93
CACNB3P54284 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.83■□□□□ 0.93
CACNB3P54284 PRSS29P-201ENST00000440800 595 ntBASIC20.83■□□□□ 0.93
CACNB3P54284 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.83■□□□□ 0.93
CACNB3P54284 OR7E47P-204ENST00000575924 449 ntBASIC20.83■□□□□ 0.93
CACNB3P54284 AC116407.2-201ENST00000613639 860 ntBASIC20.83■□□□□ 0.93
CACNB3P54284 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CACNB3P54284 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNB3P54284 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CACNB3P54284 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CACNB3P54284 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CACNB3P54284 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.83■□□□□ 0.92
CACNB3P54284 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CACNB3P54284 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CACNB3P54284 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CACNB3P54284 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CACNB3P54284 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CACNB3P54284 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.82■□□□□ 0.92
CACNB3P54284 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 IGHV3-52-201ENST00000519770 353 ntBASIC20.82■□□□□ 0.92
CACNB3P54284 SNHG9-202ENST00000564014 471 ntBASIC20.82■□□□□ 0.92
CACNB3P54284 AL353135.1-201ENST00000606729 504 ntBASIC20.82■□□□□ 0.92
CACNB3P54284 C20orf181-201ENST00000623918 480 ntBASIC20.82■□□□□ 0.92
CACNB3P54284 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.82■□□□□ 0.92
CACNB3P54284 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CACNB3P54284 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CACNB3P54284 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNB3P54284 TNXA-203ENST00000507684 2038 ntBASIC20.82■□□□□ 0.92
CACNB3P54284 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CACNB3P54284 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.81■□□□□ 0.92
CACNB3P54284 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CACNB3P54284 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
CACNB3P54284 DDX43P3-201ENST00000441064 443 ntBASIC20.81■□□□□ 0.92
CACNB3P54284 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.81■□□□□ 0.92
CACNB3P54284 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.81■□□□□ 0.92
CACNB3P54284 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CACNB3P54284 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.81■□□□□ 0.92
CACNB3P54284 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CACNB3P54284 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.81■□□□□ 0.92
CACNB3P54284 AC004877.2-201ENST00000623941 599 ntBASIC20.81■□□□□ 0.92
CACNB3P54284 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.81■□□□□ 0.92
CACNB3P54284 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.81■□□□□ 0.92
CACNB3P54284 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNB3P54284 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.8■□□□□ 0.92
CACNB3P54284 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.8■□□□□ 0.92
CACNB3P54284 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 MRPL20P1-201ENST00000400819 433 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms