Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGA2P52926 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 TSPY12P-201ENST00000421279 868 ntBASIC16.12■□□□□ 0.17
HMGA2P52926 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.12■□□□□ 0.17
HMGA2P52926 AC002558.1-201ENST00000488906 803 ntBASIC16.12■□□□□ 0.17
HMGA2P52926 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.12■□□□□ 0.17
HMGA2P52926 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGA2P52926 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 AC079602.3-201ENST00000623931 403 ntBASIC16.12■□□□□ 0.17
HMGA2P52926 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HMGA2P52926 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGA2P52926 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HMGA2P52926 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGA2P52926 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HMGA2P52926 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGA2P52926 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HMGA2P52926 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGA2P52926 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGA2P52926 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.11■□□□□ 0.17
HMGA2P52926 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGA2P52926 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGA2P52926 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGA2P52926 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGA2P52926 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGA2P52926 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HMGA2P52926 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HMGA2P52926 AC097374.2-201ENST00000618617 1306 ntBASIC16.11■□□□□ 0.17
HMGA2P52926 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HMGA2P52926 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HMGA2P52926 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 AC005915.1-201ENST00000624912 2018 ntBASIC16.11■□□□□ 0.17
HMGA2P52926 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 AC093525.9-201ENST00000624961 1746 ntBASIC16.11■□□□□ 0.17
HMGA2P52926 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGA2P52926 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGA2P52926 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGA2P52926 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 AC018695.7-201ENST00000624587 2492 ntBASIC16.1■□□□□ 0.17
HMGA2P52926 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HMGA2P52926 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms