Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCLP35914 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCLP35914 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCLP35914 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HMGCLP35914 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCLP35914 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HMGCLP35914 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.58■□□□□ 0.4
HMGCLP35914 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.58■□□□□ 0.4
HMGCLP35914 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.58■□□□□ 0.4
HMGCLP35914 AC111152.3-201ENST00000569699 673 ntBASIC17.58■□□□□ 0.4
HMGCLP35914 AC109462.3-201ENST00000573934 613 ntBASIC17.58■□□□□ 0.4
HMGCLP35914 AL591684.3-201ENST00000605187 298 ntBASIC17.58■□□□□ 0.4
HMGCLP35914 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.58■□□□□ 0.4
HMGCLP35914 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.58■□□□□ 0.4
HMGCLP35914 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.58■□□□□ 0.4
HMGCLP35914 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.58■□□□□ 0.4
HMGCLP35914 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.58■□□□□ 0.4
HMGCLP35914 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
HMGCLP35914 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HMGCLP35914 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.58■□□□□ 0.4
HMGCLP35914 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCLP35914 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 KRT8P10-201ENST00000450021 1447 ntBASIC17.57■□□□□ 0.4
HMGCLP35914 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.57■□□□□ 0.4
HMGCLP35914 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 KRT18P31-201ENST00000506277 1292 ntBASIC17.57■□□□□ 0.4
HMGCLP35914 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.57■□□□□ 0.4
HMGCLP35914 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.57■□□□□ 0.4
HMGCLP35914 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.57■□□□□ 0.4
HMGCLP35914 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.57■□□□□ 0.4
HMGCLP35914 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 AL138688.1-201ENST00000624851 1594 ntBASIC17.57■□□□□ 0.4
HMGCLP35914 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCLP35914 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCLP35914 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCLP35914 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HMGCLP35914 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGCLP35914 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HMGCLP35914 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.56■□□□□ 0.4
HMGCLP35914 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCLP35914 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.56■□□□□ 0.4
HMGCLP35914 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.56■□□□□ 0.4
HMGCLP35914 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGCLP35914 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCLP35914 AC091304.2-201ENST00000564639 760 ntBASIC17.56■□□□□ 0.4
HMGCLP35914 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCLP35914 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGCLP35914 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
HMGCLP35914 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCLP35914 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms