Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
CHMLP26374 AC122714.2-201ENST00000502787 707 ntBASIC21.29■■□□□ 1
CHMLP26374 TPSP2-201ENST00000561760 610 ntBASIC21.29■■□□□ 1
CHMLP26374 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.29■■□□□ 1
CHMLP26374 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHMLP26374 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.29■■□□□ 1
CHMLP26374 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHMLP26374 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.29■■□□□ 1
CHMLP26374 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.29■■□□□ 1
CHMLP26374 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.29■■□□□ 1
CHMLP26374 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.29■■□□□ 1
CHMLP26374 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMLP26374 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.29■■□□□ 1
CHMLP26374 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.29■■□□□ 1
CHMLP26374 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.28■■□□□ 1
CHMLP26374 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.28■■□□□ 1
CHMLP26374 AL049757.1-201ENST00000616842 1596 ntBASIC21.28■■□□□ 1
CHMLP26374 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CHMLP26374 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.28■■□□□ 1
CHMLP26374 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHMLP26374 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHMLP26374 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.28■■□□□ 1
CHMLP26374 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.28■■□□□ 1
CHMLP26374 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.28■■□□□ 1
CHMLP26374 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.28■■□□□ 1
CHMLP26374 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.28■■□□□ 1
CHMLP26374 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.28■■□□□ 1
CHMLP26374 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.28■■□□□ 1
CHMLP26374 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.28■■□□□ 1
CHMLP26374 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHMLP26374 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHMLP26374 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHMLP26374 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHMLP26374 KRT18P1-202ENST00000452408 1331 ntBASIC21.28■■□□□ 1
CHMLP26374 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMLP26374 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.27■■□□□ 1
CHMLP26374 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.27■■□□□ 1
CHMLP26374 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.27■■□□□ 1
CHMLP26374 AC233702.3-201ENST00000578656 1387 ntBASIC21.27■■□□□ 1
CHMLP26374 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
CHMLP26374 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.27■■□□□ 1
CHMLP26374 DRAXINP1-201ENST00000437611 948 ntBASIC21.27■■□□□ 1
CHMLP26374 AC109462.3-201ENST00000573934 613 ntBASIC21.27■■□□□ 1
CHMLP26374 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.27■■□□□ 1
CHMLP26374 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.27■■□□□ 1
CHMLP26374 AL358472.4-201ENST00000633140 710 ntBASIC21.27■■□□□ 1
CHMLP26374 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMLP26374 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.27■■□□□ 1
CHMLP26374 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHMLP26374 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMLP26374 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMLP26374 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.26■□□□□ 0.99
CHMLP26374 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 MIR3180-1-201ENST00000580374 94 ntBASIC21.26■□□□□ 0.99
CHMLP26374 MIR3180-3-201ENST00000584616 94 ntBASIC21.26■□□□□ 0.99
CHMLP26374 AP002414.4-201ENST00000589764 1148 ntBASIC21.26■□□□□ 0.99
CHMLP26374 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMLP26374 AP000550.4-202ENST00000639755 178 ntBASIC21.26■□□□□ 0.99
CHMLP26374 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMLP26374 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMLP26374 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms