Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
TOP1P11387 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TOP1P11387 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TOP1P11387 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TOP1P11387 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TOP1P11387 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.77■□□□□ 0.91
TOP1P11387 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 FZD10-202ENST00000539839 3282 ntBASIC20.76■□□□□ 0.91
TOP1P11387 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.76■□□□□ 0.91
TOP1P11387 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP1P11387 ABCD1P5-201ENST00000445663 754 ntBASIC20.76■□□□□ 0.91
TOP1P11387 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.76■□□□□ 0.91
TOP1P11387 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.76■□□□□ 0.91
TOP1P11387 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP1P11387 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.76■□□□□ 0.91
TOP1P11387 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP1P11387 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP1P11387 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP1P11387 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP1P11387 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TOP1P11387 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 RBM17P3-201ENST00000417687 1192 ntBASIC20.75■□□□□ 0.91
TOP1P11387 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.75■□□□□ 0.91
TOP1P11387 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.75■□□□□ 0.91
TOP1P11387 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TOP1P11387 AC008608.2-201ENST00000606089 416 ntBASIC20.75■□□□□ 0.91
TOP1P11387 AL355877.3-201ENST00000622820 899 ntBASIC20.75■□□□□ 0.91
TOP1P11387 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
TOP1P11387 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.75■□□□□ 0.91
TOP1P11387 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP1P11387 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.75■□□□□ 0.91
TOP1P11387 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TOP1P11387 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TOP1P11387 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.75■□□□□ 0.91
TOP1P11387 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 AC009949.1-201ENST00000623048 1830 ntBASIC20.74■□□□□ 0.91
TOP1P11387 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.74■□□□□ 0.91
TOP1P11387 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TOP1P11387 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TOP1P11387 DDX43P3-201ENST00000441064 443 ntBASIC20.74■□□□□ 0.91
TOP1P11387 KRT8P10-201ENST00000450021 1447 ntBASIC20.74■□□□□ 0.91
TOP1P11387 AP005117.1-201ENST00000584346 1413 ntBASIC20.74■□□□□ 0.91
TOP1P11387 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
TOP1P11387 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.74■□□□□ 0.91
TOP1P11387 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.74■□□□□ 0.91
TOP1P11387 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP1P11387 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP1P11387 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP1P11387 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP1P11387 FDX1P1-201ENST00000449115 551 ntBASIC20.73■□□□□ 0.91
TOP1P11387 AP002469.2-201ENST00000531724 424 ntBASIC20.73■□□□□ 0.91
TOP1P11387 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms