Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
CCNYL3P0C7X3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL3P0C7X3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCNYL3P0C7X3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL3P0C7X3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 AP000347.1-202ENST00000435868 847 ntBASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 AC132008.2-207ENST00000454517 770 ntBASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 AF186996.4-201ENST00000467186 377 ntBASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL3P0C7X3 AL024508.2-201ENST00000607749 1894 ntBASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 AC135776.1-201ENST00000319817 2481 ntBASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 AC093909.1-201ENST00000504731 1122 ntBASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 AP001005.1-201ENST00000571755 1248 ntBASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 AL773604.1-201ENST00000617417 272 ntBASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL3P0C7X3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 TP73-AS1-210ENST00000637775 1455 ntBASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 HLA-A-201ENST00000376802 1334 ntBASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 MTCL1P1-201ENST00000446207 792 ntBASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 AC008608.2-201ENST00000606089 416 ntBASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNYL3P0C7X3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms