Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 AC002558.1-201ENST00000488906 803 ntBASIC18.99■□□□□ 0.63
HLA-DRAP01903 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 AC109462.3-201ENST00000573934 613 ntBASIC18.99■□□□□ 0.63
HLA-DRAP01903 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DRAP01903 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AC103564.2-201ENST00000432853 1299 ntBASIC18.98■□□□□ 0.63
HLA-DRAP01903 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 NUS1P1-201ENST00000446295 882 ntBASIC18.98■□□□□ 0.63
HLA-DRAP01903 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRAP01903 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRAP01903 AL049757.1-201ENST00000616842 1596 ntBASIC18.98■□□□□ 0.63
HLA-DRAP01903 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 KRT18P56-201ENST00000507275 550 ntBASIC18.97■□□□□ 0.63
HLA-DRAP01903 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 MIR5100-201ENST00000579544 119 ntBASIC18.97■□□□□ 0.63
HLA-DRAP01903 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 AC012313.10-201ENST00000623509 926 ntBASIC18.97■□□□□ 0.63
HLA-DRAP01903 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DRAP01903 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRAP01903 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DRAP01903 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms