Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
UPK1BO75841 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 MIR149-201ENST00000384879 89 ntBASIC15.4■□□□□ 0.06
UPK1BO75841 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
UPK1BO75841 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.4■□□□□ 0.06
UPK1BO75841 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK1BO75841 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
UPK1BO75841 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
UPK1BO75841 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK1BO75841 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 MIR564-202ENST00000385049 94 ntBASIC15.39■□□□□ 0.05
UPK1BO75841 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UPK1BO75841 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.39■□□□□ 0.05
UPK1BO75841 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.39■□□□□ 0.05
UPK1BO75841 AL031432.3-201ENST00000607698 485 ntBASIC15.39■□□□□ 0.05
UPK1BO75841 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 LINC02012-201ENST00000608206 1725 ntBASIC15.39■□□□□ 0.05
UPK1BO75841 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK1BO75841 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK1BO75841 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK1BO75841 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
UPK1BO75841 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UPK1BO75841 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1BO75841 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1BO75841 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1BO75841 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1BO75841 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.38■□□□□ 0.05
UPK1BO75841 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
UPK1BO75841 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1BO75841 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
UPK1BO75841 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.38■□□□□ 0.05
UPK1BO75841 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK1BO75841 LSM12P1-201ENST00000411836 588 ntBASIC15.38■□□□□ 0.05
UPK1BO75841 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK1BO75841 AC096631.2-201ENST00000436136 790 ntBASIC15.38■□□□□ 0.05
UPK1BO75841 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.38■□□□□ 0.05
UPK1BO75841 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK1BO75841 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.38■□□□□ 0.05
UPK1BO75841 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms