Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
BRD4O60885 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC24.38■■□□□ 1.49
BRD4O60885 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
BRD4O60885 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC24.38■■□□□ 1.49
BRD4O60885 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD4O60885 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
BRD4O60885 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
BRD4O60885 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD4O60885 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD4O60885 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC24.38■■□□□ 1.49
BRD4O60885 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC24.38■■□□□ 1.49
BRD4O60885 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
BRD4O60885 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
BRD4O60885 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
BRD4O60885 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 DNAJB3-201ENST00000446806 729 ntBASIC24.37■■□□□ 1.49
BRD4O60885 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.37■■□□□ 1.49
BRD4O60885 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 AC006557.2-201ENST00000592985 1240 ntBASIC24.37■■□□□ 1.49
BRD4O60885 AP002414.3-201ENST00000589352 1468 ntBASIC24.37■■□□□ 1.49
BRD4O60885 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC24.37■■□□□ 1.49
BRD4O60885 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD4O60885 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
BRD4O60885 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
BRD4O60885 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 AC134043.2-201ENST00000624206 2238 ntBASIC24.36■■□□□ 1.49
BRD4O60885 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC24.36■■□□□ 1.49
BRD4O60885 YBX2P1-201ENST00000394192 760 ntBASIC24.36■■□□□ 1.49
BRD4O60885 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC24.36■■□□□ 1.49
BRD4O60885 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.36■■□□□ 1.49
BRD4O60885 AC009947.1-201ENST00000444350 727 ntBASIC24.36■■□□□ 1.49
BRD4O60885 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
BRD4O60885 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
BRD4O60885 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
BRD4O60885 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD4O60885 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
BRD4O60885 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 AC100803.2-201ENST00000562459 1963 ntBASIC24.35■■□□□ 1.49
BRD4O60885 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 AC073621.1-201ENST00000392730 636 ntBASIC24.35■■□□□ 1.49
BRD4O60885 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.35■■□□□ 1.49
BRD4O60885 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.35■■□□□ 1.49
BRD4O60885 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.35■■□□□ 1.49
BRD4O60885 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
BRD4O60885 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC24.35■■□□□ 1.49
BRD4O60885 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD4O60885 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
BRD4O60885 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD4O60885 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
BRD4O60885 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC24.34■■□□□ 1.49
BRD4O60885 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
BRD4O60885 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
BRD4O60885 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
BRD4O60885 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
BRD4O60885 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD4O60885 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC24.34■■□□□ 1.49
BRD4O60885 SPDYE21P-201ENST00000413323 827 ntBASIC24.34■■□□□ 1.49
BRD4O60885 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.34■■□□□ 1.49
BRD4O60885 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC24.34■■□□□ 1.49
BRD4O60885 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms