Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC018845.2-201ENST00000568326 409 ntBASIC18.82■□□□□ 0.6
HOXA2O43364 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA2O43364 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXA2O43364 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HOXA2O43364 AC092865.6-201ENST00000642101 219 ntBASIC18.82■□□□□ 0.6
HOXA2O43364 BX323043.1-201ENST00000641006 1765 ntBASIC18.82■□□□□ 0.6
HOXA2O43364 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HOXA2O43364 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA2O43364 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXA2O43364 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA2O43364 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
HOXA2O43364 AC254562.1-201ENST00000417586 456 ntBASIC18.81■□□□□ 0.6
HOXA2O43364 ACTG1P4-201ENST00000425123 1122 ntBASIC18.81■□□□□ 0.6
HOXA2O43364 AC096734.2-201ENST00000562054 433 ntBASIC18.81■□□□□ 0.6
HOXA2O43364 SNHG9-202ENST00000564014 471 ntBASIC18.81■□□□□ 0.6
HOXA2O43364 MIR4469-201ENST00000583919 79 ntBASIC18.81■□□□□ 0.6
HOXA2O43364 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXA2O43364 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA2O43364 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
HOXA2O43364 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA2O43364 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXA2O43364 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA2O43364 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA2O43364 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 KRT18P55-202ENST00000578578 1546 ntBASIC18.8■□□□□ 0.6
HOXA2O43364 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA2O43364 AP000974.1-201ENST00000623909 2387 ntBASIC18.8■□□□□ 0.6
HOXA2O43364 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HOXA2O43364 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 HTR5BP-201ENST00000430851 1154 ntBASIC18.8■□□□□ 0.6
HOXA2O43364 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXA2O43364 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HOXA2O43364 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.8■□□□□ 0.6
HOXA2O43364 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA2O43364 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA2O43364 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA2O43364 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA2O43364 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA2O43364 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HOXA2O43364 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 REXO1L9P-201ENST00000604264 2108 ntBASIC18.79■□□□□ 0.6
HOXA2O43364 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXA2O43364 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA2O43364 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HOXA2O43364 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA2O43364 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXA2O43364 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXA2O43364 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA2O43364 ALG1L5P-201ENST00000482043 771 ntBASIC18.79■□□□□ 0.6
HOXA2O43364 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.79■□□□□ 0.6
HOXA2O43364 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA2O43364 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms