Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPEO14579 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.69■□□□□ 0.42
COPEO14579 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COPEO14579 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.69■□□□□ 0.42
COPEO14579 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPEO14579 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPEO14579 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.69■□□□□ 0.42
COPEO14579 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPEO14579 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPEO14579 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.69■□□□□ 0.42
COPEO14579 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPEO14579 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.68■□□□□ 0.42
COPEO14579 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.68■□□□□ 0.42
COPEO14579 PRORSD1P-201ENST00000295112 541 ntBASIC17.68■□□□□ 0.42
COPEO14579 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.68■□□□□ 0.42
COPEO14579 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.68■□□□□ 0.42
COPEO14579 AL390955.1-201ENST00000428694 934 ntBASIC17.68■□□□□ 0.42
COPEO14579 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 AP000525.1-201ENST00000608286 694 ntBASIC17.68■□□□□ 0.42
COPEO14579 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COPEO14579 AC092865.7-201ENST00000641832 219 ntBASIC17.68■□□□□ 0.42
COPEO14579 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
COPEO14579 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
COPEO14579 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
COPEO14579 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPEO14579 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 AC016396.2-201ENST00000562575 1417 ntBASIC17.67■□□□□ 0.42
COPEO14579 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COPEO14579 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COPEO14579 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 AC009947.2-201ENST00000444014 672 ntBASIC17.67■□□□□ 0.42
COPEO14579 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.67■□□□□ 0.42
COPEO14579 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
COPEO14579 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COPEO14579 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
COPEO14579 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPEO14579 UBALD1-205ENST00000590891 2641 ntBASIC17.67■□□□□ 0.42
COPEO14579 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
COPEO14579 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COPEO14579 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.66■□□□□ 0.42
COPEO14579 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COPEO14579 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COPEO14579 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
COPEO14579 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms