Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 PCDHB18P-201ENST00000524813 2368 ntBASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC196A0A1B0GTZ2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 BNIP3P18-201ENST00000593976 575 ntBASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC196A0A1B0GTZ2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 MYCLP1-201ENST00000372451 1075 ntBASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 HCG4P8-203ENST00000443049 980 ntBASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC196A0A1B0GTZ2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC196A0A1B0GTZ2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms