Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPO2Q9UMS6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 AC046185.3-201ENST00000623228 1824 ntBASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 AC040169.1-201ENST00000565382 521 ntBASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.27■□□□□ 0.84
SYNPO2Q9UMS6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYNPO2Q9UMS6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.27■□□□□ 0.83
SYNPO2Q9UMS6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SYNPO2Q9UMS6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYNPO2Q9UMS6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.27■□□□□ 0.83
SYNPO2Q9UMS6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 LINC00304-203ENST00000565008 1864 ntBASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 KRT18P13-201ENST00000400056 1290 ntBASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 GPALPP1-207ENST00000611650 899 ntBASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 GGTLC5P-201ENST00000617623 998 ntBASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNPO2Q9UMS6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 BX842568.4-201ENST00000421222 227 ntBASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 AC108073.2-201ENST00000464002 357 ntBASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPO2Q9UMS6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPO2Q9UMS6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms