Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.21■□□□□ 0.66
NLRC4Q9NPP4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 AL359075.1-203ENST00000462729 1002 ntBASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 AC112698.1-201ENST00000510299 916 ntBASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 ZNF444P1-201ENST00000559497 298 ntBASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 LINC01451-201ENST00000623792 534 ntBASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRC4Q9NPP4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 AC099398.1-201ENST00000567919 2776 ntBASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 IGHGP-201ENST00000390555 1178 ntBASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NLRC4Q9NPP4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 TSPY5P-201ENST00000426936 936 ntBASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.18■□□□□ 0.66
NLRC4Q9NPP4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms